Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Gm15487-201ENSMUST00000122373 465 ntBASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Gm3436-201ENSMUST00000179930 840 ntBASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smarcc2Q6PDG5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Gm43703-201ENSMUST00000200523 763 ntBASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Smarcc2Q6PDG5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Matn2-206ENSMUST00000228570 2798 ntBASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Smarcc2Q6PDG5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Gm4875-201ENSMUST00000118257 786 ntBASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Gm27838-201ENSMUST00000184829 128 ntBASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Gm29741-201ENSMUST00000192667 421 ntBASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Smarcc2Q6PDG5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms