Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Gm4909-201ENSMUST00000118749 794 ntBASIC16.03■□□□□ 0.16
Scn9aQ62205 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.03■□□□□ 0.16
Scn9aQ62205 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Mir6979-201ENSMUST00000183927 56 ntBASIC16.03■□□□□ 0.16
Scn9aQ62205 Gm5781-201ENSMUST00000219792 443 ntBASIC16.03■□□□□ 0.16
Scn9aQ62205 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.03■□□□□ 0.16
Scn9aQ62205 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Scn9aQ62205 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn9aQ62205 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.02■□□□□ 0.16
Scn9aQ62205 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.02■□□□□ 0.16
Scn9aQ62205 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.02■□□□□ 0.16
Scn9aQ62205 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.02■□□□□ 0.16
Scn9aQ62205 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Scn9aQ62205 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
Scn9aQ62205 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn9aQ62205 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn9aQ62205 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.02■□□□□ 0.15
Scn9aQ62205 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scn9aQ62205 Gm15782-201ENSMUST00000121073 445 ntBASIC16.02■□□□□ 0.15
Scn9aQ62205 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn9aQ62205 Gm12363-201ENSMUST00000122250 668 ntBASIC16.02■□□□□ 0.15
Scn9aQ62205 Gm2260-201ENSMUST00000184965 657 ntBASIC16.02■□□□□ 0.15
Scn9aQ62205 Gm30285-201ENSMUST00000214614 422 ntBASIC16.02■□□□□ 0.15
Scn9aQ62205 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn9aQ62205 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scn9aQ62205 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn9aQ62205 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.02■□□□□ 0.15
Scn9aQ62205 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Scn9aQ62205 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn9aQ62205 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Scn9aQ62205 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.01■□□□□ 0.15
Scn9aQ62205 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn9aQ62205 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Scn9aQ62205 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Scn9aQ62205 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Scn9aQ62205 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Scn9aQ62205 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn9aQ62205 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Scn9aQ62205 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn9aQ62205 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Scn9aQ62205 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16■□□□□ 0.15
Scn9aQ62205 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Scn9aQ62205 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn9aQ62205 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16■□□□□ 0.15
Scn9aQ62205 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16■□□□□ 0.15
Scn9aQ62205 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scn9aQ62205 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scn9aQ62205 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn9aQ62205 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn9aQ62205 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Scn9aQ62205 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scn9aQ62205 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms