Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gli3Q61602 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gli3Q61602 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
Gli3Q61602 Gm14371-201ENSMUST00000138925 1518 ntBASIC18.27■□□□□ 0.51
Gli3Q61602 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Gli3Q61602 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Gli3Q61602 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gli3Q61602 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gli3Q61602 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gli3Q61602 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gli3Q61602 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gli3Q61602 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC18.26■□□□□ 0.51
Gli3Q61602 AC159103.1-201ENSMUST00000228325 429 ntBASIC18.26■□□□□ 0.51
Gli3Q61602 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gli3Q61602 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gli3Q61602 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gli3Q61602 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gli3Q61602 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gli3Q61602 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gli3Q61602 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gli3Q61602 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gli3Q61602 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Gli3Q61602 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC18.26■□□□□ 0.51
Gli3Q61602 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gli3Q61602 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC18.25■□□□□ 0.51
Gli3Q61602 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC18.25■□□□□ 0.51
Gli3Q61602 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 AC166095.1-201ENSMUST00000223731 1241 ntBASIC18.25■□□□□ 0.51
Gli3Q61602 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gli3Q61602 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC18.25■□□□□ 0.51
Gli3Q61602 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Gli3Q61602 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Gli3Q61602 AC174797.2-202ENSMUST00000225729 568 ntBASIC18.25■□□□□ 0.51
Gli3Q61602 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gli3Q61602 AC096628.2-201ENSMUST00000225443 1413 ntBASIC18.25■□□□□ 0.51
Gli3Q61602 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Gli3Q61602 Gm45495-201ENSMUST00000200940 1700 ntBASIC18.24■□□□□ 0.51
Gli3Q61602 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC18.24■□□□□ 0.51
Gli3Q61602 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC18.24■□□□□ 0.51
Gli3Q61602 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Mir6546-201ENSMUST00000184460 62 ntBASIC18.24■□□□□ 0.51
Gli3Q61602 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Gli3Q61602 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gli3Q61602 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Gm12500-202ENSMUST00000186471 2428 ntBASIC18.23■□□□□ 0.51
Gli3Q61602 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
Gli3Q61602 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Gm13296-201ENSMUST00000117854 997 ntBASIC18.23■□□□□ 0.51
Gli3Q61602 Gm12380-201ENSMUST00000119012 544 ntBASIC18.23■□□□□ 0.51
Gli3Q61602 Rmrp-201ENSMUST00000157463 271 ntBASIC18.23■□□□□ 0.51
Gli3Q61602 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Gli3Q61602 Gm22121-201ENSMUST00000175148 54 ntBASIC18.23■□□□□ 0.51
Gli3Q61602 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Gm29155-201ENSMUST00000185910 269 ntBASIC18.23■□□□□ 0.51
Gli3Q61602 Arhgef33-207ENSMUST00000224966 490 ntBASIC18.23■□□□□ 0.51
Gli3Q61602 AL732506.1-201ENSMUST00000226420 281 ntBASIC18.23■□□□□ 0.51
Gli3Q61602 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Gm37737-201ENSMUST00000195013 1638 ntBASIC18.23■□□□□ 0.51
Gli3Q61602 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Gli3Q61602 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gli3Q61602 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gli3Q61602 Gm8228-201ENSMUST00000189949 2192 ntBASIC18.22■□□□□ 0.51
Gli3Q61602 Gm11978-201ENSMUST00000122315 466 ntBASIC18.22■□□□□ 0.51
Gli3Q61602 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC18.22■□□□□ 0.51
Gli3Q61602 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC18.22■□□□□ 0.51
Gli3Q61602 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC18.22■□□□□ 0.51
Gli3Q61602 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gli3Q61602 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms