Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox17Q61473 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Sox17Q61473 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.02□□□□□ -0.33
Sox17Q61473 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Sox17Q61473 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.02□□□□□ -0.33
Sox17Q61473 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.01□□□□□ -0.33
Sox17Q61473 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.01□□□□□ -0.33
Sox17Q61473 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.01□□□□□ -0.33
Sox17Q61473 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.01□□□□□ -0.33
Sox17Q61473 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox17Q61473 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.01□□□□□ -0.33
Sox17Q61473 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Sox17Q61473 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox17Q61473 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Sox17Q61473 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13□□□□□ -0.33
Sox17Q61473 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 Gm6756-201ENSMUST00000180647 1620 ntBASIC13□□□□□ -0.33
Sox17Q61473 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Gm27920-201ENSMUST00000183953 96 ntBASIC13□□□□□ -0.33
Sox17Q61473 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 AC161829.1-201ENSMUST00000220298 281 ntBASIC13□□□□□ -0.33
Sox17Q61473 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Gm7461-201ENSMUST00000058918 827 ntBASIC13□□□□□ -0.33
Sox17Q61473 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox17Q61473 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox17Q61473 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.99□□□□□ -0.33
Sox17Q61473 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox17Q61473 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox17Q61473 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms