Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm13612-201ENSMUST00000119276 390 ntBASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm29127-201ENSMUST00000188304 517 ntBASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm43822-201ENSMUST00000200285 476 ntBASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc88aQ5SNZ0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc88aQ5SNZ0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm29649-201ENSMUST00000185649 419 ntBASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm6013-201ENSMUST00000212264 699 ntBASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm4857-201ENSMUST00000192718 785 ntBASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm24526-201ENSMUST00000082921 158 ntBASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc88aQ5SNZ0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm29608-201ENSMUST00000190444 463 ntBASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm38002-201ENSMUST00000193255 180 ntBASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Gm37259-201ENSMUST00000193903 849 ntBASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc88aQ5SNZ0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms