Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm7153-201ENSMUST00000117092 455 ntBASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm2445-201ENSMUST00000182798 989 ntBASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm27459-201ENSMUST00000184860 107 ntBASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm13036-201ENSMUST00000117799 748 ntBASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm7862-201ENSMUST00000121461 292 ntBASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.79□□□□□ -0.68
Trav15-1-dv6-1Q5R1D2 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms