Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf38aQ4FK66 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gm13689-201ENSMUST00000119360 685 ntBASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gm17150-201ENSMUST00000165577 381 ntBASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38aQ4FK66 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Gm6244-201ENSMUST00000178732 841 ntBASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Prpf38aQ4FK66 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Gm8463-201ENSMUST00000208573 613 ntBASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Gm5356-201ENSMUST00000093326 615 ntBASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38aQ4FK66 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms