Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm10275-201ENSMUST00000092620 635 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa3Q3UPR0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12□□□□□ -0.49
Shisa3Q3UPR0 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12□□□□□ -0.49
Shisa3Q3UPR0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Gm12106-201ENSMUST00000116006 1200 ntBASIC12□□□□□ -0.49
Shisa3Q3UPR0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Gm14822-201ENSMUST00000122247 291 ntBASIC12□□□□□ -0.49
Shisa3Q3UPR0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Gm24513-201ENSMUST00000174964 138 ntBASIC12□□□□□ -0.49
Shisa3Q3UPR0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Gm27397-201ENSMUST00000184997 107 ntBASIC12□□□□□ -0.49
Shisa3Q3UPR0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Gm9347-201ENSMUST00000211473 1607 ntBASIC12□□□□□ -0.49
Shisa3Q3UPR0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa3Q3UPR0 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gm15427-201ENSMUST00000117288 531 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gm9385-201ENSMUST00000117563 472 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gm27702-201ENSMUST00000184512 56 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gm10154-201ENSMUST00000084445 354 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa3Q3UPR0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms