Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.3□□□□□ -0.44
Rab42Q0PD08 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.3□□□□□ -0.44
Rab42Q0PD08 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Gm14140-201ENSMUST00000119999 995 ntBASIC12.3□□□□□ -0.44
Rab42Q0PD08 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Psmb5-202ENSMUST00000227257 622 ntBASIC12.3□□□□□ -0.44
Rab42Q0PD08 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.3□□□□□ -0.44
Rab42Q0PD08 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rab42Q0PD08 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.29□□□□□ -0.44
Rab42Q0PD08 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rab42Q0PD08 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.29□□□□□ -0.44
Rab42Q0PD08 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rab42Q0PD08 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rab42Q0PD08 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.28□□□□□ -0.44
Rab42Q0PD08 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.28□□□□□ -0.44
Rab42Q0PD08 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.28□□□□□ -0.44
Rab42Q0PD08 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.28□□□□□ -0.44
Rab42Q0PD08 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab42Q0PD08 Gm1401-201ENSMUST00000122048 772 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms