Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.65□□□□□ -0.22
Sox4Q06831 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sox4Q06831 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.65□□□□□ -0.22
Sox4Q06831 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sox4Q06831 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sox4Q06831 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox4Q06831 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.65□□□□□ -0.22
Sox4Q06831 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Sox4Q06831 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.64□□□□□ -0.23
Sox4Q06831 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox4Q06831 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sox4Q06831 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox4Q06831 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Sox4Q06831 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Sox4Q06831 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sox4Q06831 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Sox4Q06831 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox4Q06831 Gm12859-201ENSMUST00000117834 427 ntBASIC13.64□□□□□ -0.23
Sox4Q06831 Gm15240-201ENSMUST00000118156 720 ntBASIC13.64□□□□□ -0.23
Sox4Q06831 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Sox4Q06831 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox4Q06831 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.64□□□□□ -0.23
Sox4Q06831 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox4Q06831 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.64□□□□□ -0.23
Sox4Q06831 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox4Q06831 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Sox4Q06831 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox4Q06831 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox4Q06831 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Sox4Q06831 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.63□□□□□ -0.23
Sox4Q06831 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox4Q06831 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox4Q06831 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.63□□□□□ -0.23
Sox4Q06831 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.63□□□□□ -0.23
Sox4Q06831 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.63□□□□□ -0.23
Sox4Q06831 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox4Q06831 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Sox4Q06831 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.63□□□□□ -0.23
Sox4Q06831 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sox4Q06831 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox4Q06831 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sox4Q06831 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox4Q06831 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Sox4Q06831 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox4Q06831 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox4Q06831 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms