Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cxcr5Q04683 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cxcr5Q04683 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cxcr5Q04683 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cxcr5Q04683 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cxcr5Q04683 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Cxcr5Q04683 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.2□□□□□ -0.3
Cxcr5Q04683 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.2□□□□□ -0.3
Cxcr5Q04683 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.2□□□□□ -0.3
Cxcr5Q04683 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Rprl2-201ENSMUST00000157150 290 ntBASIC13.2□□□□□ -0.3
Cxcr5Q04683 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.2□□□□□ -0.3
Cxcr5Q04683 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.2□□□□□ -0.3
Cxcr5Q04683 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.2□□□□□ -0.3
Cxcr5Q04683 Gm44719-201ENSMUST00000206404 149 ntBASIC13.2□□□□□ -0.3
Cxcr5Q04683 Gm45453-201ENSMUST00000211758 853 ntBASIC13.2□□□□□ -0.3
Cxcr5Q04683 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcr5Q04683 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.19□□□□□ -0.3
Cxcr5Q04683 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Gm18027-201ENSMUST00000218947 619 ntBASIC13.19□□□□□ -0.3
Cxcr5Q04683 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.19□□□□□ -0.3
Cxcr5Q04683 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.19□□□□□ -0.3
Cxcr5Q04683 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcr5Q04683 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cxcr5Q04683 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms