Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.11□□□□□ -0.15
Gabpb1Q00420 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gabpb1Q00420 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.1□□□□□ -0.15
Gabpb1Q00420 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.1□□□□□ -0.15
Gabpb1Q00420 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Gm15393-201ENSMUST00000120499 219 ntBASIC14.1□□□□□ -0.15
Gabpb1Q00420 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.1□□□□□ -0.15
Gabpb1Q00420 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.1□□□□□ -0.15
Gabpb1Q00420 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gabpb1Q00420 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Gm14767-201ENSMUST00000121559 586 ntBASIC14.09□□□□□ -0.15
Gabpb1Q00420 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Gm27618-201ENSMUST00000183671 60 ntBASIC14.09□□□□□ -0.15
Gabpb1Q00420 Gm27680-201ENSMUST00000184192 160 ntBASIC14.09□□□□□ -0.15
Gabpb1Q00420 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.09□□□□□ -0.15
Gabpb1Q00420 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Mir497b-201ENSMUST00000093601 125 ntBASIC14.09□□□□□ -0.15
Gabpb1Q00420 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.09□□□□□ -0.15
Gabpb1Q00420 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gabpb1Q00420 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms