Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shox2P70390 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.72□□□□□ -0.21
Shox2P70390 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Shox2P70390 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shox2P70390 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Shox2P70390 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.71□□□□□ -0.21
Shox2P70390 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.71□□□□□ -0.21
Shox2P70390 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Shox2P70390 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Shox2P70390 AA414768-201ENSMUST00000121924 1257 ntBASIC13.71□□□□□ -0.21
Shox2P70390 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.71□□□□□ -0.21
Shox2P70390 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.71□□□□□ -0.21
Shox2P70390 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.71□□□□□ -0.21
Shox2P70390 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.71□□□□□ -0.21
Shox2P70390 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shox2P70390 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shox2P70390 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shox2P70390 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shox2P70390 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shox2P70390 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shox2P70390 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shox2P70390 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.7□□□□□ -0.22
Shox2P70390 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.7□□□□□ -0.22
Shox2P70390 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.7□□□□□ -0.22
Shox2P70390 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Shox2P70390 Gm7222-201ENSMUST00000117512 906 ntBASIC13.7□□□□□ -0.22
Shox2P70390 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Gm27357-201ENSMUST00000183754 135 ntBASIC13.7□□□□□ -0.22
Shox2P70390 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.7□□□□□ -0.22
Shox2P70390 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.7□□□□□ -0.22
Shox2P70390 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Shox2P70390 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.7□□□□□ -0.22
Shox2P70390 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Shox2P70390 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shox2P70390 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.7□□□□□ -0.22
Shox2P70390 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Shox2P70390 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shox2P70390 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms