Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Six5P70178 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.01□□□□□ -0.33
Six5P70178 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.01□□□□□ -0.33
Six5P70178 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Six5P70178 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Six5P70178 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Six5P70178 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Six5P70178 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Six5P70178 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Six5P70178 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.01□□□□□ -0.33
Six5P70178 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Six5P70178 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Six5P70178 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Six5P70178 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Six5P70178 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13□□□□□ -0.33
Six5P70178 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13□□□□□ -0.33
Six5P70178 Mir7684-201ENSMUST00000183858 60 ntBASIC13□□□□□ -0.33
Six5P70178 Mir7023-201ENSMUST00000185093 64 ntBASIC13□□□□□ -0.33
Six5P70178 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Six5P70178 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Six5P70178 AC159114.1-201ENSMUST00000220349 266 ntBASIC13□□□□□ -0.33
Six5P70178 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13□□□□□ -0.33
Six5P70178 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13□□□□□ -0.33
Six5P70178 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Six5P70178 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.99□□□□□ -0.33
Six5P70178 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Six5P70178 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Six5P70178 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Six5P70178 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.99□□□□□ -0.33
Six5P70178 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.99□□□□□ -0.33
Six5P70178 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.99□□□□□ -0.33
Six5P70178 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.99□□□□□ -0.33
Six5P70178 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Six5P70178 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Six5P70178 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Six5P70178 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Six5P70178 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms