Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.56□□□□□ -0.72
Vamp3P63024 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Vamp3P63024 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Vamp3P63024 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Vamp3P63024 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.56□□□□□ -0.72
Vamp3P63024 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Vamp3P63024 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.56□□□□□ -0.72
Vamp3P63024 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Vamp3P63024 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.56□□□□□ -0.72
Vamp3P63024 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Vamp3P63024 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Vamp3P63024 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Vamp3P63024 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.55□□□□□ -0.72
Vamp3P63024 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Gm14042-201ENSMUST00000120139 833 ntBASIC10.55□□□□□ -0.72
Vamp3P63024 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.55□□□□□ -0.72
Vamp3P63024 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC10.55□□□□□ -0.72
Vamp3P63024 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Vamp3P63024 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.55□□□□□ -0.72
Vamp3P63024 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Vamp3P63024 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Vamp3P63024 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Vamp3P63024 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Vamp3P63024 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Gm4609-201ENSMUST00000106443 1002 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Gm5138-201ENSMUST00000113842 1002 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Vamp3P63024 Gm15191-201ENSMUST00000117933 1000 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm12182-201ENSMUST00000118655 1008 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm13882-201ENSMUST00000120886 1002 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.54□□□□□ -0.72
Vamp3P63024 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Gm10284-201ENSMUST00000145057 1005 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm10481-201ENSMUST00000179228 1002 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm2574-201ENSMUST00000181051 1002 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm3200-201ENSMUST00000181493 1002 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm8825-201ENSMUST00000182565 998 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm4518-201ENSMUST00000182638 718 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm8330-201ENSMUST00000182754 1008 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm4575-201ENSMUST00000182991 1002 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm8709-201ENSMUST00000183230 1012 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC10.54□□□□□ -0.72
Vamp3P63024 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.54□□□□□ -0.72
Vamp3P63024 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Vamp3P63024 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.54□□□□□ -0.72
Vamp3P63024 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.54□□□□□ -0.72
Vamp3P63024 Gm10293-201ENSMUST00000076317 1002 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Gm6316-201ENSMUST00000082064 1020 ntBASIC10.54□□□□□ -0.72
Vamp3P63024 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms