Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Lhx1P63006 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lhx1P63006 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.63□□□□□ -0.23
Lhx1P63006 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lhx1P63006 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Lhx1P63006 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.62□□□□□ -0.23
Lhx1P63006 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lhx1P63006 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Lhx1P63006 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Gm43094-201ENSMUST00000196549 921 ntBASIC13.62□□□□□ -0.23
Lhx1P63006 Gm19078-201ENSMUST00000206311 727 ntBASIC13.62□□□□□ -0.23
Lhx1P63006 Gm18307-201ENSMUST00000206864 949 ntBASIC13.62□□□□□ -0.23
Lhx1P63006 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.62□□□□□ -0.23
Lhx1P63006 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lhx1P63006 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.62□□□□□ -0.23
Lhx1P63006 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.62□□□□□ -0.23
Lhx1P63006 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lhx1P63006 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.62□□□□□ -0.23
Lhx1P63006 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Lhx1P63006 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Lhx1P63006 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lhx1P63006 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.61□□□□□ -0.23
Lhx1P63006 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.61□□□□□ -0.23
Lhx1P63006 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.61□□□□□ -0.23
Lhx1P63006 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lhx1P63006 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Mir7654-201ENSMUST00000185082 70 ntBASIC13.61□□□□□ -0.23
Lhx1P63006 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.61□□□□□ -0.23
Lhx1P63006 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.61□□□□□ -0.23
Lhx1P63006 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.61□□□□□ -0.23
Lhx1P63006 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lhx1P63006 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.61□□□□□ -0.23
Lhx1P63006 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Lhx1P63006 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lhx1P63006 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Lhx1P63006 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.61□□□□□ -0.23
Lhx1P63006 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Lhx1P63006 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Lhx1P63006 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Lhx1P63006 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx1P63006 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.6□□□□□ -0.23
Lhx1P63006 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.6□□□□□ -0.23
Lhx1P63006 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx1P63006 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx1P63006 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx1P63006 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Lhx1P63006 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx1P63006 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.6□□□□□ -0.23
Lhx1P63006 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx1P63006 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Lhx1P63006 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms