Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lsm6P62313 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.2□□□□□ -0.46
Lsm6P62313 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lsm6P62313 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lsm6P62313 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Lsm6P62313 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lsm6P62313 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.19□□□□□ -0.46
Lsm6P62313 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm6P62313 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Lsm6P62313 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.19□□□□□ -0.46
Lsm6P62313 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.19□□□□□ -0.46
Lsm6P62313 Gm21470-201ENSMUST00000187680 696 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Gm46209-201ENSMUST00000217912 553 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Lsm6P62313 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.19□□□□□ -0.46
Lsm6P62313 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Lsm6P62313 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Lsm6P62313 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.19□□□□□ -0.46
Lsm6P62313 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm6P62313 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lsm6P62313 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lsm6P62313 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lsm6P62313 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Mir698-201ENSMUST00000102164 109 ntBASIC12.18□□□□□ -0.46
Lsm6P62313 Gm14767-201ENSMUST00000121559 586 ntBASIC12.18□□□□□ -0.46
Lsm6P62313 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Gm4804-201ENSMUST00000182234 999 ntBASIC12.18□□□□□ -0.46
Lsm6P62313 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.18□□□□□ -0.46
Lsm6P62313 Gm27680-201ENSMUST00000184192 160 ntBASIC12.18□□□□□ -0.46
Lsm6P62313 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lsm6P62313 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm6P62313 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.18□□□□□ -0.46
Lsm6P62313 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.18□□□□□ -0.46
Lsm6P62313 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.18□□□□□ -0.46
Lsm6P62313 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Lsm6P62313 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lsm6P62313 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Lsm6P62313 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm6P62313 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms