Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vbp1P61759 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vbp1P61759 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Vbp1P61759 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vbp1P61759 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vbp1P61759 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.57□□□□□ -0.4
Vbp1P61759 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Vbp1P61759 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Vbp1P61759 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Gm7977-201ENSMUST00000193787 748 ntBASIC12.57□□□□□ -0.4
Vbp1P61759 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vbp1P61759 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vbp1P61759 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vbp1P61759 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vbp1P61759 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.56□□□□□ -0.4
Vbp1P61759 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Vbp1P61759 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Vbp1P61759 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Vbp1P61759 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.56□□□□□ -0.4
Vbp1P61759 Gm6433-201ENSMUST00000118634 875 ntBASIC12.56□□□□□ -0.4
Vbp1P61759 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.56□□□□□ -0.4
Vbp1P61759 Gm11780-201ENSMUST00000136880 516 ntBASIC12.56□□□□□ -0.4
Vbp1P61759 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Gm37230-201ENSMUST00000194491 818 ntBASIC12.56□□□□□ -0.4
Vbp1P61759 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vbp1P61759 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vbp1P61759 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vbp1P61759 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.56□□□□□ -0.4
Vbp1P61759 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.56□□□□□ -0.4
Vbp1P61759 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.56□□□□□ -0.4
Vbp1P61759 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.56□□□□□ -0.4
Vbp1P61759 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vbp1P61759 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.55□□□□□ -0.4
Vbp1P61759 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vbp1P61759 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vbp1P61759 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms