Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.26□□□□□ -0.45
Sec61a1P61620 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Gm5312-201ENSMUST00000203728 547 ntBASIC12.26□□□□□ -0.45
Sec61a1P61620 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.26□□□□□ -0.45
Sec61a1P61620 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.26□□□□□ -0.45
Sec61a1P61620 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.26□□□□□ -0.45
Sec61a1P61620 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.26□□□□□ -0.45
Sec61a1P61620 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.26□□□□□ -0.45
Sec61a1P61620 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61a1P61620 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sec61a1P61620 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.25□□□□□ -0.45
Sec61a1P61620 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sec61a1P61620 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sec61a1P61620 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.25□□□□□ -0.45
Sec61a1P61620 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Sec61a1P61620 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.25□□□□□ -0.45
Sec61a1P61620 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sec61a1P61620 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sec61a1P61620 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.25□□□□□ -0.45
Sec61a1P61620 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sec61a1P61620 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61a1P61620 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Gm13616-201ENSMUST00000120600 222 ntBASIC12.24□□□□□ -0.45
Sec61a1P61620 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Sec61a1P61620 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61a1P61620 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms