Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC18.61■□□□□ 0.57
Nphp4P59240 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Gm8565-201ENSMUST00000183259 1014 ntBASIC18.61■□□□□ 0.57
Nphp4P59240 Gm5370-201ENSMUST00000187187 574 ntBASIC18.61■□□□□ 0.57
Nphp4P59240 Gm45841-201ENSMUST00000207700 164 ntBASIC18.61■□□□□ 0.57
Nphp4P59240 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Nphp4P59240 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nphp4P59240 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nphp4P59240 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nphp4P59240 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nphp4P59240 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Gm22018-201ENSMUST00000104357 131 ntBASIC18.6■□□□□ 0.57
Nphp4P59240 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Nphp4P59240 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC18.6■□□□□ 0.57
Nphp4P59240 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC18.6■□□□□ 0.57
Nphp4P59240 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Gm45684-201ENSMUST00000210244 1571 ntBASIC18.6■□□□□ 0.57
Nphp4P59240 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nphp4P59240 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.6■□□□□ 0.57
Nphp4P59240 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nphp4P59240 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.6■□□□□ 0.57
Nphp4P59240 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Nphp4P59240 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nphp4P59240 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nphp4P59240 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nphp4P59240 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Nphp4P59240 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Nphp4P59240 Gm1335-201ENSMUST00000121653 386 ntBASIC18.59■□□□□ 0.57
Nphp4P59240 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC18.59■□□□□ 0.57
Nphp4P59240 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Nphp4P59240 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Gm2639-201ENSMUST00000156881 1297 ntBASIC18.59■□□□□ 0.57
Nphp4P59240 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC18.59■□□□□ 0.57
Nphp4P59240 Gm44069-201ENSMUST00000204898 506 ntBASIC18.59■□□□□ 0.57
Nphp4P59240 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.59■□□□□ 0.57
Nphp4P59240 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.59■□□□□ 0.57
Nphp4P59240 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Nphp4P59240 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC18.59■□□□□ 0.57
Nphp4P59240 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nphp4P59240 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nphp4P59240 Trav4d-2-201ENSMUST00000120914 335 ntBASIC18.58■□□□□ 0.57
Nphp4P59240 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Nphp4P59240 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nphp4P59240 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Nphp4P59240 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC18.58■□□□□ 0.57
Nphp4P59240 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC18.58■□□□□ 0.57
Nphp4P59240 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nphp4P59240 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nphp4P59240 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Nphp4P59240 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Nphp4P59240 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nphp4P59240 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nphp4P59240 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nphp4P59240 Gm7899-201ENSMUST00000192935 1897 ntBASIC18.58■□□□□ 0.57
Nphp4P59240 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms