Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Rrp1P56183 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.66■□□□□ 0.1
Rrp1P56183 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.66■□□□□ 0.1
Rrp1P56183 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.66■□□□□ 0.1
Rrp1P56183 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.66■□□□□ 0.1
Rrp1P56183 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Gm2756-201ENSMUST00000195851 400 ntBASIC15.66■□□□□ 0.1
Rrp1P56183 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rrp1P56183 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rrp1P56183 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rrp1P56183 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rrp1P56183 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rrp1P56183 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rrp1P56183 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Rrp1P56183 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.65■□□□□ 0.1
Rrp1P56183 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.65■□□□□ 0.1
Rrp1P56183 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.65■□□□□ 0.1
Rrp1P56183 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.65■□□□□ 0.1
Rrp1P56183 Gm45453-201ENSMUST00000211758 853 ntBASIC15.65■□□□□ 0.1
Rrp1P56183 Gm18027-201ENSMUST00000218947 619 ntBASIC15.65■□□□□ 0.1
Rrp1P56183 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.65■□□□□ 0.1
Rrp1P56183 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.65■□□□□ 0.1
Rrp1P56183 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Rrp1P56183 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rrp1P56183 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.65■□□□□ 0.1
Rrp1P56183 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rrp1P56183 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.64■□□□□ 0.09
Rrp1P56183 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.64■□□□□ 0.09
Rrp1P56183 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.64■□□□□ 0.09
Rrp1P56183 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.64■□□□□ 0.09
Rrp1P56183 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.64■□□□□ 0.09
Rrp1P56183 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.64■□□□□ 0.09
Rrp1P56183 Gm44719-201ENSMUST00000206404 149 ntBASIC15.64■□□□□ 0.09
Rrp1P56183 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.64■□□□□ 0.09
Rrp1P56183 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rrp1P56183 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.64■□□□□ 0.09
Rrp1P56183 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Rrp1P56183 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rrp1P56183 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rrp1P56183 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rrp1P56183 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rrp1P56183 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rrp1P56183 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rrp1P56183 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms