Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdh11P55288 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Cdh11P55288 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.69□□□□□ -0.38
Cdh11P55288 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh11P55288 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdh11P55288 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh11P55288 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cdh11P55288 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.68□□□□□ -0.38
Cdh11P55288 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Cdh11P55288 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Gm2810-201ENSMUST00000118681 990 ntBASIC12.68□□□□□ -0.38
Cdh11P55288 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.68□□□□□ -0.38
Cdh11P55288 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Gm9824-201ENSMUST00000178707 561 ntBASIC12.68□□□□□ -0.38
Cdh11P55288 Gm38225-201ENSMUST00000194001 393 ntBASIC12.68□□□□□ -0.38
Cdh11P55288 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cdh11P55288 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdh11P55288 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.68□□□□□ -0.38
Cdh11P55288 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cdh11P55288 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdh11P55288 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh11P55288 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdh11P55288 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cdh11P55288 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.67□□□□□ -0.38
Cdh11P55288 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Gm5779-201ENSMUST00000218467 910 ntBASIC12.67□□□□□ -0.38
Cdh11P55288 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdh11P55288 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdh11P55288 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdh11P55288 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh11P55288 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Cdh11P55288 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdh11P55288 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdh11P55288 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms