Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CtskP55097 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.66□□□□□ -0.22
CtskP55097 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
CtskP55097 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CtskP55097 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
CtskP55097 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.66□□□□□ -0.22
CtskP55097 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.66□□□□□ -0.22
CtskP55097 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.66□□□□□ -0.22
CtskP55097 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.66□□□□□ -0.22
CtskP55097 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Gm19220-201ENSMUST00000222682 803 ntBASIC13.66□□□□□ -0.22
CtskP55097 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CtskP55097 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CtskP55097 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CtskP55097 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.65□□□□□ -0.22
CtskP55097 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CtskP55097 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.65□□□□□ -0.22
CtskP55097 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.65□□□□□ -0.22
CtskP55097 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.65□□□□□ -0.22
CtskP55097 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
CtskP55097 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.65□□□□□ -0.22
CtskP55097 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.65□□□□□ -0.22
CtskP55097 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.65□□□□□ -0.22
CtskP55097 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.65□□□□□ -0.22
CtskP55097 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CtskP55097 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CtskP55097 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CtskP55097 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.65□□□□□ -0.22
CtskP55097 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.65□□□□□ -0.22
CtskP55097 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.65□□□□□ -0.22
CtskP55097 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
CtskP55097 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CtskP55097 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CtskP55097 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
CtskP55097 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CtskP55097 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CtskP55097 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.64□□□□□ -0.23
CtskP55097 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CtskP55097 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms