Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.47■□□□□ 0.39
Msh6P54276 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.47■□□□□ 0.39
Msh6P54276 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.47■□□□□ 0.39
Msh6P54276 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.47■□□□□ 0.39
Msh6P54276 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.47■□□□□ 0.39
Msh6P54276 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.47■□□□□ 0.39
Msh6P54276 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.47■□□□□ 0.39
Msh6P54276 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.47■□□□□ 0.39
Msh6P54276 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Msh6P54276 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Msh6P54276 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Msh6P54276 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
Msh6P54276 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Msh6P54276 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Msh6P54276 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
Msh6P54276 Gm8213-201ENSMUST00000118191 441 ntBASIC17.46■□□□□ 0.39
Msh6P54276 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.46■□□□□ 0.39
Msh6P54276 Gm6152-201ENSMUST00000151704 340 ntBASIC17.46■□□□□ 0.39
Msh6P54276 Gm9823-201ENSMUST00000051212 327 ntBASIC17.46■□□□□ 0.39
Msh6P54276 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Msh6P54276 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Msh6P54276 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Msh6P54276 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.46■□□□□ 0.39
Msh6P54276 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Msh6P54276 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.45■□□□□ 0.38
Msh6P54276 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.45■□□□□ 0.38
Msh6P54276 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.45■□□□□ 0.38
Msh6P54276 Gm19184-201ENSMUST00000196798 928 ntBASIC17.45■□□□□ 0.38
Msh6P54276 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.45■□□□□ 0.38
Msh6P54276 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Msh6P54276 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.45■□□□□ 0.38
Msh6P54276 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Msh6P54276 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.45■□□□□ 0.38
Msh6P54276 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Msh6P54276 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.44■□□□□ 0.38
Msh6P54276 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.44■□□□□ 0.38
Msh6P54276 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Msh6P54276 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.44■□□□□ 0.38
Msh6P54276 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Gm38002-201ENSMUST00000193255 180 ntBASIC17.44■□□□□ 0.38
Msh6P54276 Gm43118-201ENSMUST00000199149 775 ntBASIC17.44■□□□□ 0.38
Msh6P54276 Gm29705-201ENSMUST00000212598 474 ntBASIC17.44■□□□□ 0.38
Msh6P54276 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.44■□□□□ 0.38
Msh6P54276 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Gm24447-201ENSMUST00000083977 338 ntBASIC17.44■□□□□ 0.38
Msh6P54276 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Msh6P54276 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Msh6P54276 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Msh6P54276 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms