Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CntfP51642 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CntfP51642 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CntfP51642 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CntfP51642 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CntfP51642 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CntfP51642 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CntfP51642 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CntfP51642 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CntfP51642 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
CntfP51642 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CntfP51642 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CntfP51642 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CntfP51642 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.02□□□□□ -0.33
CntfP51642 Gm8000-201ENSMUST00000188378 592 ntBASIC13.02□□□□□ -0.33
CntfP51642 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.02□□□□□ -0.33
CntfP51642 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CntfP51642 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CntfP51642 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CntfP51642 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CntfP51642 Grk6-205ENSMUST00000224653 2976 ntBASIC13.02□□□□□ -0.33
CntfP51642 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CntfP51642 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CntfP51642 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CntfP51642 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CntfP51642 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CntfP51642 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CntfP51642 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.01□□□□□ -0.33
CntfP51642 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.01□□□□□ -0.33
CntfP51642 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Gm11745-201ENSMUST00000121669 448 ntBASIC13.01□□□□□ -0.33
CntfP51642 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CntfP51642 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.01□□□□□ -0.33
CntfP51642 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.01□□□□□ -0.33
CntfP51642 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.01□□□□□ -0.33
CntfP51642 Gm6443-201ENSMUST00000203599 874 ntBASIC13.01□□□□□ -0.33
CntfP51642 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.01□□□□□ -0.33
CntfP51642 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.01□□□□□ -0.33
CntfP51642 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CntfP51642 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.01□□□□□ -0.33
CntfP51642 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.01□□□□□ -0.33
CntfP51642 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CntfP51642 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.01□□□□□ -0.33
CntfP51642 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.01□□□□□ -0.33
CntfP51642 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CntfP51642 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CntfP51642 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CntfP51642 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms