Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rph3aP47708 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rph3aP47708 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
Rph3aP47708 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.43□□□□□ -0.26
Rph3aP47708 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Rph3aP47708 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rph3aP47708 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rph3aP47708 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rph3aP47708 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.42□□□□□ -0.26
Rph3aP47708 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.42□□□□□ -0.26
Rph3aP47708 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.42□□□□□ -0.26
Rph3aP47708 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.42□□□□□ -0.26
Rph3aP47708 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.42□□□□□ -0.26
Rph3aP47708 Gm27680-201ENSMUST00000184192 160 ntBASIC13.42□□□□□ -0.26
Rph3aP47708 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.42□□□□□ -0.26
Rph3aP47708 Gm44344-201ENSMUST00000200287 129 ntBASIC13.42□□□□□ -0.26
Rph3aP47708 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Gm46209-201ENSMUST00000217912 553 ntBASIC13.42□□□□□ -0.26
Rph3aP47708 Gm9229-201ENSMUST00000222777 126 ntBASIC13.42□□□□□ -0.26
Rph3aP47708 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.42□□□□□ -0.26
Rph3aP47708 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
Rph3aP47708 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.42□□□□□ -0.26
Rph3aP47708 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rph3aP47708 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rph3aP47708 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.41□□□□□ -0.26
Rph3aP47708 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Rph3aP47708 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rph3aP47708 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rph3aP47708 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.41□□□□□ -0.26
Rph3aP47708 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Rph3aP47708 Gm33320-201ENSMUST00000192232 530 ntBASIC13.41□□□□□ -0.26
Rph3aP47708 Gm38294-201ENSMUST00000192831 381 ntBASIC13.41□□□□□ -0.26
Rph3aP47708 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.41□□□□□ -0.26
Rph3aP47708 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.41□□□□□ -0.26
Rph3aP47708 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rph3aP47708 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms