Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msh2P43247 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msh2P43247 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Msh2P43247 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msh2P43247 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msh2P43247 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.33□□□□□ -0.11
Msh2P43247 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Msh2P43247 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Msh2P43247 Gm25287-201ENSMUST00000103846 110 ntBASIC14.33□□□□□ -0.12
Msh2P43247 Gm22918-201ENSMUST00000103855 110 ntBASIC14.33□□□□□ -0.12
Msh2P43247 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Msh2P43247 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Msh2P43247 Gm14701-201ENSMUST00000117156 348 ntBASIC14.33□□□□□ -0.12
Msh2P43247 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.33□□□□□ -0.12
Msh2P43247 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.33□□□□□ -0.12
Msh2P43247 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Gm5312-201ENSMUST00000203728 547 ntBASIC14.33□□□□□ -0.12
Msh2P43247 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.33□□□□□ -0.12
Msh2P43247 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Msh2P43247 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msh2P43247 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Msh2P43247 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh2P43247 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Msh2P43247 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Msh2P43247 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh2P43247 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.32□□□□□ -0.12
Msh2P43247 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Msh2P43247 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.32□□□□□ -0.12
Msh2P43247 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.32□□□□□ -0.12
Msh2P43247 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.32□□□□□ -0.12
Msh2P43247 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.32□□□□□ -0.12
Msh2P43247 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Msh2P43247 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Msh2P43247 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Msh2P43247 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Msh2P43247 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Msh2P43247 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Msh2P43247 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.32□□□□□ -0.12
Msh2P43247 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msh2P43247 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Msh2P43247 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Msh2P43247 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.31□□□□□ -0.12
Msh2P43247 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Msh2P43247 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Msh2P43247 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.31□□□□□ -0.12
Msh2P43247 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh2P43247 Gm22065-201ENSMUST00000103753 110 ntBASIC14.31□□□□□ -0.12
Msh2P43247 Gm22066-201ENSMUST00000103761 110 ntBASIC14.31□□□□□ -0.12
Msh2P43247 Gm24932-201ENSMUST00000103763 110 ntBASIC14.31□□□□□ -0.12
Msh2P43247 Gm24115-201ENSMUST00000103799 110 ntBASIC14.31□□□□□ -0.12
Msh2P43247 Gm22190-201ENSMUST00000103827 110 ntBASIC14.31□□□□□ -0.12
Msh2P43247 Gm22191-201ENSMUST00000103831 110 ntBASIC14.31□□□□□ -0.12
Msh2P43247 Gm24721-201ENSMUST00000103849 110 ntBASIC14.31□□□□□ -0.12
Msh2P43247 Gm28018-201ENSMUST00000103869 110 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms