Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.84□□□□□ -0.19
LdlrP35951 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.84□□□□□ -0.19
LdlrP35951 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.84□□□□□ -0.19
LdlrP35951 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.84□□□□□ -0.19
LdlrP35951 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LdlrP35951 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LdlrP35951 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
LdlrP35951 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.83□□□□□ -0.19
LdlrP35951 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LdlrP35951 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.83□□□□□ -0.19
LdlrP35951 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
LdlrP35951 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.83□□□□□ -0.19
LdlrP35951 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
LdlrP35951 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.83□□□□□ -0.19
LdlrP35951 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.83□□□□□ -0.2
LdlrP35951 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LdlrP35951 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LdlrP35951 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.83□□□□□ -0.2
LdlrP35951 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.83□□□□□ -0.2
LdlrP35951 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
LdlrP35951 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.83□□□□□ -0.2
LdlrP35951 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.83□□□□□ -0.2
LdlrP35951 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
LdlrP35951 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LdlrP35951 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
LdlrP35951 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.82□□□□□ -0.2
LdlrP35951 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.82□□□□□ -0.2
LdlrP35951 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.82□□□□□ -0.2
LdlrP35951 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LdlrP35951 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.82□□□□□ -0.2
LdlrP35951 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LdlrP35951 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
LdlrP35951 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms