Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sox5P35710 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sox5P35710 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Gm14494-201ENSMUST00000118786 435 ntBASIC15.16■□□□□ 0.02
Sox5P35710 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.16■□□□□ 0.02
Sox5P35710 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.16■□□□□ 0.02
Sox5P35710 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.16■□□□□ 0.02
Sox5P35710 Gm18027-201ENSMUST00000218947 619 ntBASIC15.16■□□□□ 0.02
Sox5P35710 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Sox5P35710 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.16■□□□□ 0.02
Sox5P35710 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.16■□□□□ 0.02
Sox5P35710 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Sox5P35710 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sox5P35710 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.15■□□□□ 0.02
Sox5P35710 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sox5P35710 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sox5P35710 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox5P35710 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sox5P35710 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Sox5P35710 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sox5P35710 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Sox5P35710 Gm11779-201ENSMUST00000118541 368 ntBASIC15.15■□□□□ 0.02
Sox5P35710 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.15■□□□□ 0.02
Sox5P35710 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.15■□□□□ 0.02
Sox5P35710 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Rprl2-201ENSMUST00000157150 290 ntBASIC15.15■□□□□ 0.02
Sox5P35710 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.15■□□□□ 0.02
Sox5P35710 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sox5P35710 Mir125a-201ENSMUST00000083545 68 ntBASIC15.15■□□□□ 0.02
Sox5P35710 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Sox5P35710 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.15■□□□□ 0.02
Sox5P35710 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Sox5P35710 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.15■□□□□ 0.02
Sox5P35710 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sox5P35710 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.14■□□□□ 0.01
Sox5P35710 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox5P35710 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Sox5P35710 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox5P35710 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.14■□□□□ 0.01
Sox5P35710 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Sox5P35710 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.14■□□□□ 0.01
Sox5P35710 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Sox5P35710 AC154725.1-201ENSMUST00000224826 1961 ntBASIC15.14■□□□□ 0.01
Sox5P35710 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox5P35710 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox5P35710 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox5P35710 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.14■□□□□ 0.01
Sox5P35710 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox5P35710 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sox5P35710 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms