Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Mmp13P33435 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Mmp13P33435 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Mmp13P33435 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.22□□□□□ -0.13
Mmp13P33435 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Mmp13P33435 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Mmp13P33435 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Gm8410-201ENSMUST00000117225 605 ntBASIC14.22□□□□□ -0.13
Mmp13P33435 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.22□□□□□ -0.13
Mmp13P33435 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.22□□□□□ -0.13
Mmp13P33435 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.22□□□□□ -0.13
Mmp13P33435 Gm10576-201ENSMUST00000191927 825 ntBASIC14.22□□□□□ -0.13
Mmp13P33435 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mmp13P33435 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mmp13P33435 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Mmp13P33435 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Mmp13P33435 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Mmp13P33435 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.22□□□□□ -0.13
Mmp13P33435 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Mmp13P33435 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp13P33435 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.21□□□□□ -0.13
Mmp13P33435 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.21□□□□□ -0.13
Mmp13P33435 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.21□□□□□ -0.13
Mmp13P33435 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.21□□□□□ -0.13
Mmp13P33435 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Mmp13P33435 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.21□□□□□ -0.13
Mmp13P33435 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.21□□□□□ -0.13
Mmp13P33435 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Mmp13P33435 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.21□□□□□ -0.13
Mmp13P33435 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.21□□□□□ -0.13
Mmp13P33435 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Mmp13P33435 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp13P33435 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Mmp13P33435 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.21□□□□□ -0.14
Mmp13P33435 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp13P33435 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Mmp13P33435 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Mmp13P33435 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Mmp13P33435 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp13P33435 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms