Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.2□□□□□ -0.3
Slc6a11P31650 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Gm12151-201ENSMUST00000121374 290 ntBASIC13.2□□□□□ -0.3
Slc6a11P31650 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.2□□□□□ -0.3
Slc6a11P31650 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.2□□□□□ -0.3
Slc6a11P31650 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.2□□□□□ -0.3
Slc6a11P31650 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Slc6a11P31650 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Slc6a11P31650 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.19□□□□□ -0.3
Slc6a11P31650 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.19□□□□□ -0.3
Slc6a11P31650 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a11P31650 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a11P31650 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a11P31650 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.18□□□□□ -0.3
Slc6a11P31650 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a11P31650 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Gm18737-201ENSMUST00000173594 937 ntBASIC13.18□□□□□ -0.3
Slc6a11P31650 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.18□□□□□ -0.3
Slc6a11P31650 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a11P31650 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a11P31650 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms