Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.25□□□□□ -0.45
Cd28P31041 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.25□□□□□ -0.45
Cd28P31041 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cd28P31041 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.24□□□□□ -0.45
Cd28P31041 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Cd28P31041 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.24□□□□□ -0.45
Cd28P31041 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Cd28P31041 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Ank2-226ENSMUST00000189368 339 ntBASIC12.24□□□□□ -0.45
Cd28P31041 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.24□□□□□ -0.45
Cd28P31041 Gm10060-201ENSMUST00000212002 111 ntBASIC12.24□□□□□ -0.45
Cd28P31041 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cd28P31041 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cd28P31041 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.23□□□□□ -0.45
Cd28P31041 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cd28P31041 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.23□□□□□ -0.45
Cd28P31041 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cd28P31041 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cd28P31041 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cd28P31041 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Gm24589-201ENSMUST00000116692 94 ntBASIC12.23□□□□□ -0.45
Cd28P31041 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cd28P31041 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.23□□□□□ -0.45
Cd28P31041 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.23□□□□□ -0.45
Cd28P31041 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.23□□□□□ -0.45
Cd28P31041 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cd28P31041 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.22□□□□□ -0.45
Cd28P31041 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Cd28P31041 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cd28P31041 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cd28P31041 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cd28P31041 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.22□□□□□ -0.45
Cd28P31041 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.22□□□□□ -0.45
Cd28P31041 Gm15483-201ENSMUST00000120338 456 ntBASIC12.22□□□□□ -0.45
Cd28P31041 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Cd28P31041 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Cd28P31041 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.22□□□□□ -0.45
Cd28P31041 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Cd28P31041 Gm25925-201ENSMUST00000158314 306 ntBASIC12.22□□□□□ -0.45
Cd28P31041 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.22□□□□□ -0.45
Cd28P31041 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cd28P31041 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cd28P31041 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms