Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm10012-201ENSMUST00000078252 192 ntBASIC14.13□□□□□ -0.15
Hmga1P17095 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Hmga1P17095 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmga1P17095 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.13□□□□□ -0.15
Hmga1P17095 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Hmga1P17095 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hmga1P17095 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hmga1P17095 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmga1P17095 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmga1P17095 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmga1P17095 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmga1P17095 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmga1P17095 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmga1P17095 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmga1P17095 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmga1P17095 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.12□□□□□ -0.15
Hmga1P17095 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Hmga1P17095 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmga1P17095 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmga1P17095 Gm18062-201ENSMUST00000208020 547 ntBASIC14.12□□□□□ -0.15
Hmga1P17095 Gm18055-201ENSMUST00000208254 547 ntBASIC14.12□□□□□ -0.15
Hmga1P17095 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmga1P17095 Gm17330-201ENSMUST00000221047 165 ntBASIC14.12□□□□□ -0.15
Hmga1P17095 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.12□□□□□ -0.15
Hmga1P17095 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmga1P17095 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmga1P17095 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hmga1P17095 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.12□□□□□ -0.15
Hmga1P17095 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmga1P17095 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Hmga1P17095 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hmga1P17095 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hmga1P17095 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hmga1P17095 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hmga1P17095 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Gm4984-201ENSMUST00000115987 360 ntBASIC14.11□□□□□ -0.15
Hmga1P17095 Gm15770-201ENSMUST00000117498 584 ntBASIC14.11□□□□□ -0.15
Hmga1P17095 Gm13612-201ENSMUST00000119276 390 ntBASIC14.11□□□□□ -0.15
Hmga1P17095 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmga1P17095 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Gm27486-201ENSMUST00000184923 80 ntBASIC14.11□□□□□ -0.15
Hmga1P17095 Gm7561-201ENSMUST00000211203 886 ntBASIC14.11□□□□□ -0.15
Hmga1P17095 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Hmga1P17095 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hmga1P17095 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmga1P17095 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmga1P17095 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmga1P17095 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmga1P17095 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmga1P17095 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmga1P17095 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmga1P17095 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmga1P17095 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hmga1P17095 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Hmga1P17095 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmga1P17095 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hmga1P17095 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmga1P17095 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmga1P17095 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmga1P17095 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.1□□□□□ -0.15
Hmga1P17095 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmga1P17095 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmga1P17095 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.1□□□□□ -0.15
Hmga1P17095 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms