Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.49□□□□□ -0.57
Cxcl1P12850 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 AA619741-201ENSMUST00000195095 646 ntBASIC11.49□□□□□ -0.57
Cxcl1P12850 Gm20553-201ENSMUST00000204205 844 ntBASIC11.49□□□□□ -0.57
Cxcl1P12850 Gm44719-201ENSMUST00000206404 149 ntBASIC11.49□□□□□ -0.57
Cxcl1P12850 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cxcl1P12850 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.49□□□□□ -0.57
Cxcl1P12850 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 BC001981-202ENSMUST00000191393 1545 ntBASIC11.49□□□□□ -0.57
Cxcl1P12850 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.49□□□□□ -0.57
Cxcl1P12850 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl1P12850 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cxcl1P12850 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.48□□□□□ -0.57
Cxcl1P12850 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.48□□□□□ -0.57
Cxcl1P12850 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.48□□□□□ -0.57
Cxcl1P12850 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 AA543401-201ENSMUST00000164248 1269 ntBASIC11.48□□□□□ -0.57
Cxcl1P12850 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cxcl1P12850 Gm29741-201ENSMUST00000192667 421 ntBASIC11.48□□□□□ -0.57
Cxcl1P12850 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.48□□□□□ -0.57
Cxcl1P12850 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cxcl1P12850 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.48□□□□□ -0.57
Cxcl1P12850 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.48□□□□□ -0.57
Cxcl1P12850 Psmb5-202ENSMUST00000227257 622 ntBASIC11.48□□□□□ -0.57
Cxcl1P12850 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cxcl1P12850 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.48□□□□□ -0.57
Cxcl1P12850 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.48□□□□□ -0.57
Cxcl1P12850 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cxcl1P12850 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cxcl1P12850 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl1P12850 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms