Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccl3P10855 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl3P10855 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Ccl3P10855 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccl3P10855 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.21□□□□□ -0.46
Ccl3P10855 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccl3P10855 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccl3P10855 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.2□□□□□ -0.46
Ccl3P10855 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccl3P10855 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccl3P10855 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccl3P10855 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccl3P10855 Gm8584-201ENSMUST00000171982 758 ntBASIC12.2□□□□□ -0.46
Ccl3P10855 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccl3P10855 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Gm29608-201ENSMUST00000190444 463 ntBASIC12.2□□□□□ -0.46
Ccl3P10855 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccl3P10855 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.2□□□□□ -0.46
Ccl3P10855 Gm9823-201ENSMUST00000051212 327 ntBASIC12.2□□□□□ -0.46
Ccl3P10855 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccl3P10855 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccl3P10855 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccl3P10855 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.19□□□□□ -0.46
Ccl3P10855 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccl3P10855 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Gm15770-201ENSMUST00000117498 584 ntBASIC12.19□□□□□ -0.46
Ccl3P10855 Gm1335-201ENSMUST00000121653 386 ntBASIC12.19□□□□□ -0.46
Ccl3P10855 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccl3P10855 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccl3P10855 Gm19184-201ENSMUST00000196798 928 ntBASIC12.19□□□□□ -0.46
Ccl3P10855 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.19□□□□□ -0.46
Ccl3P10855 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ccl3P10855 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Ccl3P10855 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccl3P10855 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Ccl3P10855 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Ccl3P10855 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccl3P10855 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ccl3P10855 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccl3P10855 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms