Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
PtcraP0C6B2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.07□□□□□ -0.48
PtcraP0C6B2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.07□□□□□ -0.48
PtcraP0C6B2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PtcraP0C6B2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Gm15240-201ENSMUST00000118156 720 ntBASIC12.06□□□□□ -0.48
PtcraP0C6B2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Gm27838-201ENSMUST00000184829 128 ntBASIC12.06□□□□□ -0.48
PtcraP0C6B2 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.06□□□□□ -0.48
PtcraP0C6B2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
PtcraP0C6B2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms