Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04224 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.19□□□□□ -0.46
P04224 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P04224 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
P04224 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
P04224 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.19□□□□□ -0.46
P04224 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04224 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04224 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
P04224 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
P04224 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
P04224 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P04224 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04224 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P04224 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
P04224 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
P04224 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
P04224 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
P04224 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.18□□□□□ -0.46
P04224 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.18□□□□□ -0.46
P04224 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.18□□□□□ -0.46
P04224 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Gm4899-201ENSMUST00000178708 719 ntBASIC12.18□□□□□ -0.46
P04224 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
P04224 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
P04224 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
P04224 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P04224 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
P04224 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.17□□□□□ -0.46
P04224 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
P04224 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
P04224 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
P04224 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.17□□□□□ -0.46
P04224 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
P04224 Gm24589-201ENSMUST00000116692 94 ntBASIC12.17□□□□□ -0.46
P04224 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.17□□□□□ -0.46
P04224 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
P04224 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
P04224 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
P04224 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.17□□□□□ -0.46
P04224 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.17□□□□□ -0.46
P04224 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
P04224 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.17□□□□□ -0.46
P04224 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.17□□□□□ -0.46
P04224 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
P04224 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.17□□□□□ -0.46
P04224 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P04224 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms