Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Krt1P04104 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Krt1P04104 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.11□□□□□ -0.31
Krt1P04104 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Krt1P04104 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Gm12644-201ENSMUST00000119935 606 ntBASIC13.11□□□□□ -0.31
Krt1P04104 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.11□□□□□ -0.31
Krt1P04104 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Krt1P04104 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.11□□□□□ -0.31
Krt1P04104 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Krt1P04104 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Krt1P04104 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Krt1P04104 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.11□□□□□ -0.31
Krt1P04104 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Krt1P04104 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.1□□□□□ -0.31
Krt1P04104 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Krt1P04104 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.1□□□□□ -0.31
Krt1P04104 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.1□□□□□ -0.31
Krt1P04104 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Krt1P04104 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Krt1P04104 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.1□□□□□ -0.31
Krt1P04104 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.1□□□□□ -0.31
Krt1P04104 Gm10252-201ENSMUST00000209541 832 ntBASIC13.1□□□□□ -0.31
Krt1P04104 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.1□□□□□ -0.31
Krt1P04104 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Krt1P04104 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
Krt1P04104 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.1□□□□□ -0.31
Krt1P04104 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.1□□□□□ -0.31
Krt1P04104 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.1□□□□□ -0.31
Krt1P04104 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.1□□□□□ -0.31
Krt1P04104 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.1□□□□□ -0.31
Krt1P04104 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.1□□□□□ -0.31
Krt1P04104 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Krt1P04104 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Krt1P04104 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Krt1P04104 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Krt1P04104 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.09□□□□□ -0.31
Krt1P04104 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.09□□□□□ -0.31
Krt1P04104 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.09□□□□□ -0.31
Krt1P04104 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Krt1P04104 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Krt1P04104 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.09□□□□□ -0.31
Krt1P04104 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Krt1P04104 Gm2445-201ENSMUST00000182798 989 ntBASIC13.09□□□□□ -0.31
Krt1P04104 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.09□□□□□ -0.31
Krt1P04104 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms