Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
NgfP01139 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.19□□□□□ -0.46
NgfP01139 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.19□□□□□ -0.46
NgfP01139 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
NgfP01139 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.19□□□□□ -0.46
NgfP01139 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
NgfP01139 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.19□□□□□ -0.46
NgfP01139 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.19□□□□□ -0.46
NgfP01139 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.19□□□□□ -0.46
NgfP01139 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.19□□□□□ -0.46
NgfP01139 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.19□□□□□ -0.46
NgfP01139 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.19□□□□□ -0.46
NgfP01139 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
NgfP01139 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.18□□□□□ -0.46
NgfP01139 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NgfP01139 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.18□□□□□ -0.46
NgfP01139 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
NgfP01139 Gm23931-201ENSMUST00000103842 109 ntBASIC12.18□□□□□ -0.46
NgfP01139 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
NgfP01139 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.18□□□□□ -0.46
NgfP01139 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.18□□□□□ -0.46
NgfP01139 Gm5370-201ENSMUST00000187187 574 ntBASIC12.18□□□□□ -0.46
NgfP01139 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Gm29705-201ENSMUST00000212598 474 ntBASIC12.18□□□□□ -0.46
NgfP01139 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.18□□□□□ -0.46
NgfP01139 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.18□□□□□ -0.46
NgfP01139 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.18□□□□□ -0.46
NgfP01139 Gm26315-201ENSMUST00000083890 321 ntBASIC12.18□□□□□ -0.46
NgfP01139 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.18□□□□□ -0.46
NgfP01139 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.18□□□□□ -0.46
NgfP01139 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
NgfP01139 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NgfP01139 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.17□□□□□ -0.46
NgfP01139 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.17□□□□□ -0.46
NgfP01139 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
NgfP01139 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NgfP01139 Gm5187-201ENSMUST00000117317 991 ntBASIC12.17□□□□□ -0.46
NgfP01139 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms