Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syn1O88935 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syn1O88935 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syn1O88935 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syn1O88935 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syn1O88935 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syn1O88935 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Syn1O88935 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syn1O88935 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syn1O88935 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.26□□□□□ -0.13
Syn1O88935 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syn1O88935 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Syn1O88935 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Syn1O88935 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.25□□□□□ -0.13
Syn1O88935 Gm12203-201ENSMUST00000118235 598 ntBASIC14.25□□□□□ -0.13
Syn1O88935 Gm12209-201ENSMUST00000120089 596 ntBASIC14.25□□□□□ -0.13
Syn1O88935 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.25□□□□□ -0.13
Syn1O88935 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Gm16505-201ENSMUST00000179981 232 ntBASIC14.25□□□□□ -0.13
Syn1O88935 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.25□□□□□ -0.13
Syn1O88935 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.25□□□□□ -0.13
Syn1O88935 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.25□□□□□ -0.13
Syn1O88935 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.25□□□□□ -0.13
Syn1O88935 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.25□□□□□ -0.13
Syn1O88935 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Syn1O88935 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.25□□□□□ -0.13
Syn1O88935 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Syn1O88935 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.25□□□□□ -0.13
Syn1O88935 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syn1O88935 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Gm22323-201ENSMUST00000103832 109 ntBASIC14.24□□□□□ -0.13
Syn1O88935 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.24□□□□□ -0.13
Syn1O88935 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.24□□□□□ -0.13
Syn1O88935 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Gm2991-201ENSMUST00000173338 480 ntBASIC14.24□□□□□ -0.13
Syn1O88935 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Syn1O88935 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.24□□□□□ -0.13
Syn1O88935 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.24□□□□□ -0.13
Syn1O88935 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.24□□□□□ -0.13
Syn1O88935 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Syn1O88935 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syn1O88935 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.23□□□□□ -0.13
Syn1O88935 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Syn1O88935 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Gm24255-201ENSMUST00000104481 128 ntBASIC14.23□□□□□ -0.13
Syn1O88935 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Syn1O88935 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.23□□□□□ -0.13
Syn1O88935 Gm13385-201ENSMUST00000121089 220 ntBASIC14.23□□□□□ -0.13
Syn1O88935 Gm6152-201ENSMUST00000151704 340 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms