Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col5a1O88207 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.34□□□□□ -0.43
Col5a1O88207 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col5a1O88207 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.34□□□□□ -0.43
Col5a1O88207 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.34□□□□□ -0.43
Col5a1O88207 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.34□□□□□ -0.43
Col5a1O88207 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.34□□□□□ -0.43
Col5a1O88207 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.34□□□□□ -0.43
Col5a1O88207 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.34□□□□□ -0.43
Col5a1O88207 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col5a1O88207 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col5a1O88207 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.34□□□□□ -0.43
Col5a1O88207 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Col5a1O88207 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col5a1O88207 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col5a1O88207 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.43
Col5a1O88207 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Col5a1O88207 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Col5a1O88207 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.33□□□□□ -0.44
Col5a1O88207 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col5a1O88207 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col5a1O88207 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.33□□□□□ -0.44
Col5a1O88207 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Col5a1O88207 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.33□□□□□ -0.44
Col5a1O88207 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Gm37986-201ENSMUST00000193285 383 ntBASIC12.33□□□□□ -0.44
Col5a1O88207 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.33□□□□□ -0.44
Col5a1O88207 Itm2b-204ENSMUST00000228637 783 ntBASIC12.33□□□□□ -0.44
Col5a1O88207 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Snora73a-201ENSMUST00000082453 205 ntBASIC12.33□□□□□ -0.44
Col5a1O88207 Gm24447-201ENSMUST00000083977 338 ntBASIC12.33□□□□□ -0.44
Col5a1O88207 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.33□□□□□ -0.44
Col5a1O88207 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.33□□□□□ -0.44
Col5a1O88207 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Col5a1O88207 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col5a1O88207 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Col5a1O88207 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.32□□□□□ -0.44
Col5a1O88207 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.32□□□□□ -0.44
Col5a1O88207 Gm7029-201ENSMUST00000173226 450 ntBASIC12.32□□□□□ -0.44
Col5a1O88207 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.32□□□□□ -0.44
Col5a1O88207 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.32□□□□□ -0.44
Col5a1O88207 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col5a1O88207 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col5a1O88207 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.32□□□□□ -0.44
Col5a1O88207 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms