Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Cxcl13O55038 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.72□□□□□ -0.53
Cxcl13O55038 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Gm27892-201ENSMUST00000185017 106 ntBASIC11.72□□□□□ -0.53
Cxcl13O55038 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cxcl13O55038 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cxcl13O55038 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cxcl13O55038 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.72□□□□□ -0.53
Cxcl13O55038 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cxcl13O55038 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl13O55038 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cxcl13O55038 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.71□□□□□ -0.53
Cxcl13O55038 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.71□□□□□ -0.53
Cxcl13O55038 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 Gm15824-201ENSMUST00000119516 955 ntBASIC11.71□□□□□ -0.53
Cxcl13O55038 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.71□□□□□ -0.53
Cxcl13O55038 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.71□□□□□ -0.53
Cxcl13O55038 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.71□□□□□ -0.53
Cxcl13O55038 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.71□□□□□ -0.53
Cxcl13O55038 Gm17150-201ENSMUST00000165577 381 ntBASIC11.71□□□□□ -0.53
Cxcl13O55038 Gm6244-201ENSMUST00000178732 841 ntBASIC11.71□□□□□ -0.53
Cxcl13O55038 Gm2495-201ENSMUST00000191160 466 ntBASIC11.71□□□□□ -0.53
Cxcl13O55038 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.71□□□□□ -0.53
Cxcl13O55038 Gm17794-201ENSMUST00000220252 955 ntBASIC11.71□□□□□ -0.53
Cxcl13O55038 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cxcl13O55038 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl13O55038 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl13O55038 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl13O55038 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl13O55038 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl13O55038 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl13O55038 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cxcl13O55038 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cxcl13O55038 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl13O55038 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Cxcl13O55038 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.7□□□□□ -0.54
Cxcl13O55038 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl13O55038 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl13O55038 Gm4984-201ENSMUST00000115987 360 ntBASIC11.7□□□□□ -0.54
Cxcl13O55038 Gm15371-201ENSMUST00000117057 784 ntBASIC11.7□□□□□ -0.54
Cxcl13O55038 Gm13689-201ENSMUST00000119360 685 ntBASIC11.7□□□□□ -0.54
Cxcl13O55038 Gm13829-201ENSMUST00000119600 138 ntBASIC11.7□□□□□ -0.54
Cxcl13O55038 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.7□□□□□ -0.54
Cxcl13O55038 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.7□□□□□ -0.54
Cxcl13O55038 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl13O55038 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Gm2445-201ENSMUST00000182798 989 ntBASIC11.7□□□□□ -0.54
Cxcl13O55038 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.7□□□□□ -0.54
Cxcl13O55038 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cxcl13O55038 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.7□□□□□ -0.54
Cxcl13O55038 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cxcl13O55038 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cxcl13O55038 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cxcl13O55038 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms