Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.43□□□□□ -0.42
NlkO54949 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.43□□□□□ -0.42
NlkO54949 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.43□□□□□ -0.42
NlkO54949 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.43□□□□□ -0.42
NlkO54949 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.43□□□□□ -0.42
NlkO54949 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.43□□□□□ -0.42
NlkO54949 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NlkO54949 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
NlkO54949 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.43□□□□□ -0.42
NlkO54949 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NlkO54949 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NlkO54949 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NlkO54949 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.42□□□□□ -0.42
NlkO54949 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
NlkO54949 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
NlkO54949 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NlkO54949 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NlkO54949 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.42□□□□□ -0.42
NlkO54949 Gm16198-201ENSMUST00000118766 670 ntBASIC12.42□□□□□ -0.42
NlkO54949 Gm15467-201ENSMUST00000120582 445 ntBASIC12.42□□□□□ -0.42
NlkO54949 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Gm43514-201ENSMUST00000198852 424 ntBASIC12.42□□□□□ -0.42
NlkO54949 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.42□□□□□ -0.42
NlkO54949 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NlkO54949 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NlkO54949 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.42□□□□□ -0.42
NlkO54949 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.41□□□□□ -0.42
NlkO54949 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.41□□□□□ -0.42
NlkO54949 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.41□□□□□ -0.42
NlkO54949 Gm11779-201ENSMUST00000118541 368 ntBASIC12.41□□□□□ -0.42
NlkO54949 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
NlkO54949 Mir3113-201ENSMUST00000175478 76 ntBASIC12.41□□□□□ -0.42
NlkO54949 Gm27301-201ENSMUST00000184012 127 ntBASIC12.41□□□□□ -0.42
NlkO54949 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.41□□□□□ -0.42
NlkO54949 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
NlkO54949 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
NlkO54949 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms