Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6bO35451 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.09□□□□□ -0.47
Atf6bO35451 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.09□□□□□ -0.47
Atf6bO35451 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.09□□□□□ -0.47
Atf6bO35451 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.09□□□□□ -0.47
Atf6bO35451 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.09□□□□□ -0.47
Atf6bO35451 Gm12882-201ENSMUST00000121696 517 ntBASIC12.09□□□□□ -0.47
Atf6bO35451 Mir1897-201ENSMUST00000122581 272 ntBASIC12.09□□□□□ -0.47
Atf6bO35451 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.09□□□□□ -0.47
Atf6bO35451 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Atf6bO35451 Mir7023-201ENSMUST00000185093 64 ntBASIC12.09□□□□□ -0.47
Atf6bO35451 Gm44344-201ENSMUST00000200287 129 ntBASIC12.09□□□□□ -0.47
Atf6bO35451 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.09□□□□□ -0.47
Atf6bO35451 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.09□□□□□ -0.47
Atf6bO35451 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.09□□□□□ -0.47
Atf6bO35451 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.09□□□□□ -0.47
Atf6bO35451 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Atf6bO35451 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Atf6bO35451 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Atf6bO35451 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Atf6bO35451 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Atf6bO35451 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Atf6bO35451 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Atf6bO35451 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6bO35451 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Atf6bO35451 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Atf6bO35451 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Atf6bO35451 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Atf6bO35451 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Gm15653-201ENSMUST00000119247 907 ntBASIC12.08□□□□□ -0.48
Atf6bO35451 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.08□□□□□ -0.48
Atf6bO35451 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Atf6bO35451 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.08□□□□□ -0.48
Atf6bO35451 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Atf6bO35451 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Atf6bO35451 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.08□□□□□ -0.48
Atf6bO35451 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.08□□□□□ -0.48
Atf6bO35451 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Atf6bO35451 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Atf6bO35451 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
Atf6bO35451 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Atf6bO35451 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf6bO35451 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms