Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cx3cl1O35188 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Gm27838-201ENSMUST00000184829 128 ntBASIC13.07□□□□□ -0.32
Cx3cl1O35188 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.07□□□□□ -0.32
Cx3cl1O35188 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.07□□□□□ -0.32
Cx3cl1O35188 Rubie-203ENSMUST00000227803 2430 ntBASIC13.07□□□□□ -0.32
Cx3cl1O35188 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.07□□□□□ -0.32
Cx3cl1O35188 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Gm14719-201ENSMUST00000121891 340 ntBASIC13.06□□□□□ -0.32
Cx3cl1O35188 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Gm21470-201ENSMUST00000187680 696 ntBASIC13.06□□□□□ -0.32
Cx3cl1O35188 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.06□□□□□ -0.32
Cx3cl1O35188 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.06□□□□□ -0.32
Cx3cl1O35188 Gm18027-201ENSMUST00000218947 619 ntBASIC13.06□□□□□ -0.32
Cx3cl1O35188 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.06□□□□□ -0.32
Cx3cl1O35188 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cx3cl1O35188 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.05□□□□□ -0.32
Cx3cl1O35188 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Gm8584-201ENSMUST00000171982 758 ntBASIC13.05□□□□□ -0.32
Cx3cl1O35188 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Gm37714-201ENSMUST00000194742 342 ntBASIC13.05□□□□□ -0.32
Cx3cl1O35188 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.05□□□□□ -0.32
Cx3cl1O35188 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cx3cl1O35188 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms