Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Hdac1O09106 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hdac1O09106 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.51■□□□□ 0.23
Hdac1O09106 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.51■□□□□ 0.23
Hdac1O09106 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.51■□□□□ 0.23
Hdac1O09106 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Hdac1O09106 Rprl2-201ENSMUST00000157150 290 ntBASIC16.51■□□□□ 0.23
Hdac1O09106 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.51■□□□□ 0.23
Hdac1O09106 Gm18049-201ENSMUST00000208909 581 ntBASIC16.51■□□□□ 0.23
Hdac1O09106 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hdac1O09106 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Hdac1O09106 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hdac1O09106 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.5■□□□□ 0.23
Hdac1O09106 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hdac1O09106 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.5■□□□□ 0.23
Hdac1O09106 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.5■□□□□ 0.23
Hdac1O09106 Gm29541-201ENSMUST00000191351 678 ntBASIC16.5■□□□□ 0.23
Hdac1O09106 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Hdac1O09106 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hdac1O09106 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.5■□□□□ 0.23
Hdac1O09106 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hdac1O09106 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hdac1O09106 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.5■□□□□ 0.23
Hdac1O09106 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Hdac1O09106 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.49■□□□□ 0.23
Hdac1O09106 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.49■□□□□ 0.23
Hdac1O09106 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.49■□□□□ 0.23
Hdac1O09106 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.49■□□□□ 0.23
Hdac1O09106 Gm12428-201ENSMUST00000119844 727 ntBASIC16.49■□□□□ 0.23
Hdac1O09106 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.49■□□□□ 0.23
Hdac1O09106 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.49■□□□□ 0.23
Hdac1O09106 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.49■□□□□ 0.23
Hdac1O09106 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.49■□□□□ 0.23
Hdac1O09106 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.49■□□□□ 0.23
Hdac1O09106 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Hdac1O09106 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Hdac1O09106 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.49■□□□□ 0.23
Hdac1O09106 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hdac1O09106 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Hdac1O09106 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Hdac1O09106 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hdac1O09106 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.48■□□□□ 0.23
Hdac1O09106 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms