Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Raet1bO08603 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1bO08603 Gm15460-201ENSMUST00000118147 391 ntBASIC12.33□□□□□ -0.44
Raet1bO08603 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.33□□□□□ -0.44
Raet1bO08603 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.33□□□□□ -0.44
Raet1bO08603 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.33□□□□□ -0.44
Raet1bO08603 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.33□□□□□ -0.44
Raet1bO08603 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Raet1bO08603 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1bO08603 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1bO08603 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1bO08603 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.33□□□□□ -0.44
Raet1bO08603 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1bO08603 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
Raet1bO08603 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1bO08603 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1bO08603 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Raet1bO08603 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Raet1bO08603 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.32□□□□□ -0.44
Raet1bO08603 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.32□□□□□ -0.44
Raet1bO08603 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.32□□□□□ -0.44
Raet1bO08603 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.32□□□□□ -0.44
Raet1bO08603 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.32□□□□□ -0.44
Raet1bO08603 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Raet1bO08603 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Raet1bO08603 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Gm6888-201ENSMUST00000221983 706 ntBASIC12.32□□□□□ -0.44
Raet1bO08603 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Raet1bO08603 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Raet1bO08603 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.32□□□□□ -0.44
Raet1bO08603 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Raet1bO08603 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Raet1bO08603 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.31□□□□□ -0.44
Raet1bO08603 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Raet1bO08603 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.31□□□□□ -0.44
Raet1bO08603 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Raet1bO08603 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.31□□□□□ -0.44
Raet1bO08603 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.31□□□□□ -0.44
Raet1bO08603 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Gm17837-201ENSMUST00000186435 985 ntBASIC12.31□□□□□ -0.44
Raet1bO08603 Gm44344-201ENSMUST00000200287 129 ntBASIC12.31□□□□□ -0.44
Raet1bO08603 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.31□□□□□ -0.44
Raet1bO08603 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Raet1bO08603 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Raet1bO08603 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Raet1bO08603 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Raet1bO08603 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Raet1bO08603 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.3□□□□□ -0.44
Raet1bO08603 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Raet1bO08603 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Raet1bO08603 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.3□□□□□ -0.44
Raet1bO08603 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Raet1bO08603 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Raet1bO08603 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Raet1bO08603 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms