Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Gm44719-201ENSMUST00000206404 149 ntBASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Srp54bE9PXC0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Gm4984-201ENSMUST00000115987 360 ntBASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Gm6244-201ENSMUST00000178732 841 ntBASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Gm17794-201ENSMUST00000220252 955 ntBASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.66□□□□□ -0.22
Srp54bE9PXC0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Mir1894-201ENSMUST00000122802 81 ntBASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.65□□□□□ -0.22
Srp54bE9PXC0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms