Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Gm10253-201ENSMUST00000194270 940 ntBASIC15.22■□□□□ 0.03
Trim30cD3YVI9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Gm7774-201ENSMUST00000200064 533 ntBASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim30cD3YVI9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Gm25948-201ENSMUST00000175334 112 ntBASIC15.21■□□□□ 0.03
Trim30cD3YVI9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim30cD3YVI9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim30cD3YVI9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim30cD3YVI9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim30cD3YVI9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim30cD3YVI9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Gm8749-201ENSMUST00000117737 331 ntBASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Gm5479-201ENSMUST00000160578 435 ntBASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.2■□□□□ 0.02
Trim30cD3YVI9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Gm2451-201ENSMUST00000199447 999 ntBASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Gm10290-201ENSMUST00000200451 999 ntBASIC15.2■□□□□ 0.02
Trim30cD3YVI9 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim30cD3YVI9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim30cD3YVI9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms