Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.24□□□□□ -0.61
Gm12887B1AVM1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm2445-201ENSMUST00000182798 989 ntBASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm17807-201ENSMUST00000186869 298 ntBASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm33142-201ENSMUST00000193913 867 ntBASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm2272-201ENSMUST00000194903 582 ntBASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Gm12887B1AVM1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.22□□□□□ -0.61
Gm12887B1AVM1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Gm12887B1AVM1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Gm12887B1AVM1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms